Insertion junction: CLIP2.064712_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.064712
Chromosome:chromosome 7
Location:4714070
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g345300 UAP1 UDP-N-acetylglucosamine-pyrophosphorylase-related protein; (1 of 1) K00972 - UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase (UAP1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAGACACAGGCCCAGTAGGGACGCAAAGACAGGTGCAGGTCGTGTTAT
Internal bar code:TCTTGGATATGTGGAGCCTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:169
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ACACCTACCGTACTCCGACA
Suggested primer 2:GACCGTGTCTGTGTGTACGT