Insertion junction: CLIP2.064715_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.064715
Chromosome:chromosome 1
Location:6710148
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g047950 IFT27,Rabl4,FAP156 (1 of 1) K07934 - intraflagellar transport protein 27 homolog (IFT27, RAYL, RABL4); Intraflagellar transport protein 27 3'UTR
Cre01.g048000 TPM1 Tropomyosin 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCCCCCCCCCTTTCGGAAGCTTACACAATCGCTGGTACCGGTATGCCA
Internal bar code:TATCGCTTGAGCGCTACATAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3668
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:ACTCCTACAGCAGCAGCAAG
Suggested primer 2:CACCACCTTCTACCGCAACT