Insertion junction: CLIP2.064717_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.064717
Chromosome:chromosome 4
Location:3096781
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g225650 (1 of 1) PF00031 - Cystatin domain (Cystatin) 5'UTR
Cre04.g225700 (1 of 1) IPR023401 - Ornithine cyclodeaminase, N-terminal 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGTAGACAAAACCCCGCTGGACCTCTATCGCATCCCACCGAGACAAAC
Internal bar code:GCCTGGTTTTCGTCGCTGGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1540
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:AATCCGGGTATTCGACGAGC
Suggested primer 2:TGAGCAGGCCCGAATTGAAT