Insertion junction: CLIP2.064720_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.064720
Chromosome:chromosome 11
Location:1800842
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467650 (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGCTTTTACAACCGAGGCTGTGACAAGCCAGGAAATGAACCATTTGCG
Internal bar code:AAGCTTTAATGGTATCCTTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2327
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:81
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGGACCGTATGCTAAGGG
Suggested primer 2:GGGCGTTGAGAAACTCGAGA