Insertion junction: CLIP2.064725_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.064725
Chromosome:chromosome 5
Location:3024314
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g231000 CSA5 Chlorophyceae-specific gene family A protein outside_mRNA
Cre05.g800571 (1 of 1) IPR007730 - Sporulation-related domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCCCGGTATTGTGTGGCGGCTGTACATCAGTGCAGTATGTCAGGCAGG
Internal bar code:TGTTAGTAGGTTTTAAGTCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:4049
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGCGAGTATGGGGGAAA
Suggested primer 2:CTTCATCAGCTGCGTGCATC