Insertion junction: CLIP2.064732_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.064732
Chromosome:chromosome 9
Location:3258530
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394917 (1 of 4) PTHR16255//PTHR16255:SF4 - UNCHARACTERIZED // SPORULATION PROTEIN RMD8 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATAGCAGAAGTGGAAAAGGATGTGCGTGCATCTGCGTGCATGTGTAGAT
Internal bar code:TACTTCAGTTTAAATTTCACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1920
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:82
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:82

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGCCATTGGTATCCATCG
Suggested primer 2:TGGGTCCTGCATCTTCACAC