Insertion junction: CLIP2.064734_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.064734
Chromosome:chromosome 1
Location:4157265
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g027764 (1 of 11) K03327 - multidrug resistance protein, MATE family (TC.MATE, SLC47A, norM, mdtK, dinF) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATATATCCTGGGTAGATTGGGGCACGTGGGTTGCCCCGCGTTTGTTAGG
Internal bar code:AGCAGTGACCGATCTGTTAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1038
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CATCCACCCACTCCCTTTCC
Suggested primer 2:AATGGCATTCTGGGTCCTGG