Insertion junction: CLIP2.064736_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.064736
Chromosome:chromosome 3
Location:6399944
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g192750 (1 of 4) 2.7.11.13 - Protein kinase C / PKC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGATTATATTTACGGACGGGGGGCTTGTCCGATCGTGGGAAGTGGCTTG
Internal bar code:CGTTTATTCCTCTGCTTTGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2626
LEAP-Seq percent confirming:91.4286
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCCTTGTTTGTTTCCCCT
Suggested primer 2:ATCCCCTTACTCCCCCTTCC