Insertion junction: CLIP2.064738_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.064738
Chromosome:chromosome 8
Location:2053989
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g368950 SHK2, DHQS,DQS1,DHQS,DHQS1 (1 of 1) 4.2.3.4 - 3-dehydroquinate synthase / Dehydroquinate synthase; 3-dehydroquinate synthase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTGTTCTGAATGGGAGTGCGGTAGTCAGGGACTAACTTTTATGTGTGT
Internal bar code:GAGTGCCGTATTTTCGTCTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3141
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:ATCACCTGCCAACATCCCAG
Suggested primer 2:ATGACCACTGAGCAGTTCCG