Insertion junction: CLIP2.064739_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.064739
Chromosome:chromosome 8
Location:3803385
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g381250 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGAGTTTCCTCGCGGTGCCCGGGAGGGATTCGCGCTAGAAGCTGCTAG
Internal bar code:TGAGTCTGCAGGAGCGGTGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:5415
LEAP-Seq percent confirming:13.9535
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:74
LEAP-Seq n unique pos:86

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGCTGTAACTGTAAGGCA
Suggested primer 2:GATAGATGGGGGCGGACAAG