Insertion junction: CLIP2.064743_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.064743
Chromosome:chromosome 11
Location:1844903
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre11.g467400 (1 of 3) IPR000104//IPR001859 - Antifreeze protein, type I // Trypanosoma cruzi ribosomal protein P2-like 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGCGCGTGCGTGGGTTCCGCACACCTCGGCGGCACACGGGATGCCTGG
Internal bar code:ACGTCATTCTTTCACAGCAGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2065
LEAP-Seq percent confirming:2.94118
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:AAACCGCAATGAGGTACCGT
Suggested primer 2:CCCTTTGACAGCTCCGAGAG