Insertion junction: CLIP2.064749_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.064749
Chromosome:chromosome 8
Location:3866642
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g381750 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACAGTCGGCCTACAGCCCCCAGACTTCCTCGTTCGCGAGCGCAAAGA
Internal bar code:TAATACACAAGCGGGTTCAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2242
LEAP-Seq percent confirming:72.3404
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:CGATGGCCGTGATGGTATCA
Suggested primer 2:TTCAACGCATCCCATCGTCA