Insertion junction: CLIP2.064753_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.064753
Chromosome:chromosome 7
Location:3647331
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g337300 DSK2,DYRK2,DYRKP1,DYRKP,STD1 Dual-Specificity Tyrosine-Regulated Protein Kinase involved in starch degradation; (1 of 2) PTHR24058//PTHR24058:SF23 - DUAL SPECIFICITY PROTEIN KINASE // SERINE/THREONINE KINASE-RELATED 5'UTR
Cre07.g337350 GT90F8,GT90-8 GT90 family protein 8; (1 of 52) PF05686 - Glycosyl transferase family 90 (Glyco_transf_90) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACTGCATCGATTTTTCTGCCAGATCAAGTAGTATTCAATAACCACAGGT
Internal bar code:CCGAGGGAGAGCGCCCTAGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2307
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTGAGTTGACAAGCGCAC
Suggested primer 2:CCTCACTCTTGCTCACACGT