Insertion junction: CLIP2.064759_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.064759
Chromosome:chromosome 6
Location:4702916
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g279050 (1 of 7) PTHR11584:SF381 - PROTEIN PQN-80, ISOFORM B 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCCAACCAAGGACCCCAGGGAACAACCTAAACAAGTGAGAGTCTGTGC
Internal bar code:GACGACATGGTCTACTAACTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1448
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTTACTATCTGTCGGCGT
Suggested primer 2:CGACCTAGTCCGCAGATTCC