Insertion junction: CLIP2.064761_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.064761
Chromosome:chromosome 4
Location:1438554
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g214150 THI4 Thiazole biosynthetic enzyme; (1 of 1) K03146 - thiamine thiazole synthase (THI4, THI1) 5'UTR
Cre04.g214200 (1 of 30) IPR000253 - Forkhead-associated (FHA) domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGGTCGCCCCCTCTCGCGCGATGGGCCGCAATGAGACGTACAGCGCTC
Internal bar code:GTTACGGCAGTAGACGTTTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1505
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TTACCGTCAGTGACATGCCC
Suggested primer 2:GCTAAGCGAACTTCATGCGG