Insertion junction: CLIP2.064766_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.064766
Chromosome:chromosome 16
Location:1527647
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g653300 BLZ19 bZIP transcription factor; (1 of 21) IPR004827 - Basic-leucine zipper domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATTCGTGCAGGGGGTGAGGAGATGCCCAGTATGTTTAGTAAGCGCGGGG
Internal bar code:CGGGCATCATACAATATGTATC

Confirmation - LEAP-Seq

LEAP-Seq distance:2238
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AACCCGTAGTTGCTAGTGCC
Suggested primer 2:CTGCATGGGTGGTGTGTTTG