Insertion junction: CLIP2.064789_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.064789
Chromosome:chromosome 12
Location:1381788
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g488850 AP2A1 Alpha2-Adaptin; (1 of 1) K11824 - AP-2 complex subunit alpha (AP2A) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCACTCCTATACTTGCTGTGTTAGGTGGGAGCGCGGCTCATGTGTTGC
Internal bar code:CATAACAATCCTGTTTTATTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4035
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TTTTGTCGGGAGAGTCGGTG
Suggested primer 2:ACATGCGTGCATTTTGGCTT