Insertion junction: CLIP2.064789_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.064789
Chromosome:chromosome 12
Location:1381788
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g488850 AP2A1 Alpha2-Adaptin; (1 of 1) K11824 - AP-2 complex subunit alpha (AP2A) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTTGACGCCAATGTTCATGGCGAAAACCGCATCCCAACTAGGAGCTCA
Internal bar code:CATAACAATCCTGTTTTATTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1375
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:ACATGCGTGCATTTTGGCTT
Suggested primer 2:TTTTGTCGGGAGAGTCGGTG