Insertion junction: CLIP2.064795_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.064795
Chromosome:chromosome 10
Location:1352058
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g427700 HEL47 (1 of 1) PTHR24031:SF235 - DEAD-BOX ATP-DEPENDENT RNA HELICASE 37-RELATED; DEAD box ATP-dependent RNA helicase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATTATCATATCCACTTTCTTGCCCAACGCGGGCTATGCTTATCCCGCTC
Internal bar code:GGGTTTTTGTTAATTAGTGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3564
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCTGAACGTAATGCTGCG
Suggested primer 2:CAACCGACAGCGCAAAAGAA