Insertion junction: CLIP2.064796_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.064796
Chromosome:chromosome 1
Location:3180103
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g020223 FUM2 (1 of 1) K01679 - fumarate hydratase, class II (E4.2.1.2B, fumC); Fumarate hydratase 2 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTTTTGTCGACGACGTTGCTGACTGGACGGTGCCACGGCAACACAGAT
Internal bar code:GCGCTGGTAGCGTACATAAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2428
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TCTTGCACTTGAAACGCACG
Suggested primer 2:TTGTCAAACACGCTCGCTTG