Insertion junction: CLIP2.064800_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.064800
Chromosome:chromosome 15
Location:953223
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g639650 RAP24,OPR92,NCL11 Nuclear Control of chloroplast Like 11 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCAACATCCCGCCCGACACGAGAGGGGCAGAAACGGCGGGGCAGACGG
Internal bar code:CTAAGACGGTCCTGCTGAAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2430
LEAP-Seq percent confirming:31.25
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TGGATGCTAGTGGATGGGGA
Suggested primer 2:TGCTACTGTTGAGTGCTGGG