Insertion junction: CLIP2.064804_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.064804
Chromosome:chromosome 17
Location:3362278
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g723000 5'UTR
Cre17.g723050 (1 of 8) PTHR23023//PTHR23023:SF130 - DIMETHYLANILINE MONOOXYGENASE // INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA1-RELATED outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTTCCAACCGTCGCCGCTGCATGCAGACCCTGCCATACAGGGCGTACA
Internal bar code:CACAATCTATTTTTGAAAGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2855
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTTAGGGCCCTGTTCATT
Suggested primer 2:AACGCAGCCCATTTGCATTT