Insertion junction: CLIP2.064805_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.064805
Chromosome:chromosome 11
Location:127332
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467536 (1 of 38) IPR000719//IPR002290//IPR011009 - Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTACAACGATATGATATAGCGTTGACGAGCTGCCAGTAGCAGCGAGGC
Internal bar code:GGATAAATACGTTAGTAGAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1527
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:AACGCAAAGTCACGAAGCAC
Suggested primer 2:GATGGCCCTAATACCGTGGG