Insertion junction: CLIP2.064813_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.064813
Chromosome:chromosome 14
Location:1104360
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g614750 CPNAT1,cpNAT1,NAT34 (1 of 1) 2.3.1.189 - Mycothiol synthase; Ribosome-associated chloroplast-localized N-acetyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCCTTCCGTTTGGGTGGCAGCGCCTGTGCGATGCGTCCTCTACAGGGA
Internal bar code:TTTCCATTTTCCTGATTCTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1562
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GGACCGGGCTATACGTCAAG
Suggested primer 2:TTCGCTAATAGGTCGTCGGC