Insertion junction: CLIP2.064816_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.064816
Chromosome:chromosome 12
Location:1323964
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g489300 (1 of 2) IPR000742//IPR001881//IPR009030 - EGF-like domain // EGF-like calcium-binding domain // Insulin-like growth factor binding protein, N-terminal 3'UTR
Cre12.g489350 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCCATGTGCGCTGCGCCCACAAGGAAAGTCCGTCATAAAGCCGGGGGG
Internal bar code:ACGTGCTGCTTACCAAGTGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:4084
LEAP-Seq percent confirming:95.7895
LEAP-Seq n confirming:91
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:95

Suggested primers for confirmation by PCR

Suggested primer 1:ACTCGCTTCCACGACCAAAT
Suggested primer 2:TTCTTGACCTAAGGCCTGCG