Insertion junction: CLIP2.064820_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.064820
Chromosome:chromosome 16
Location:296331
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g801865 (1 of 1) 1.14.11.42 - tRNA(Phe) (7-(3-amino-3-carboxypropyl)wyosine(37)-C(2))-hydroxylase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGTAGTGTCGCGTTAATTACTTCAGCTGCATGTCTCCAGCAAACGCGTG
Internal bar code:CGGGTAATGCTGCAGCCAATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1182
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTTGGCCCAAGGGTCTTT
Suggested primer 2:GCCCCTGTAGACAAGCCATT