Insertion junction: CLIP2.064826_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.064826
Chromosome:chromosome 2
Location:6665465
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g390100 SMM34 (1 of 1) 2.1.1.103 - Phosphoethanolamine N-methyltransferase; S-adenosyl-L-methionine-dependent methyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAAGTCAACAAGTGTCCAGTACACAATCGAATGCCAGCCATGCTCACT
Internal bar code:TTGGGCTATGGACCCTCGACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1187
LEAP-Seq percent confirming:96.875
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTGAGGTCGAACGGATAG
Suggested primer 2:CCAGGCCTCATCCATTGTGT