Insertion junction: CLIP2.064828_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.064828
Chromosome:chromosome 3
Location:6219881
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre03.g191450 5'UTR
Cre03.g191500 (1 of 2) PTHR11373:SF4 - DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE SAMHD1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGAAATTCAGGCACGCCCGCATAAGTCCCTCTTTCGTGTGCAAGTATAC
Internal bar code:GTACTTGCACGGCTTGGACTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1135
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:ACACCACGATGTCCCAGAAC
Suggested primer 2:CGACCAGCACGTCTGATCTT