Insertion junction: CLIP2.064829_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.064829
Chromosome:chromosome 2
Location:7246423
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g391134 (1 of 16) IPR003903 - Ubiquitin interacting motif 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTCCGTCATTCGGATTTGAGTCGCCTTCGCGCCTTGCCATCGGCGCGC
Internal bar code:GTCTTTGATAGCCGCTTAGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1890
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CGAATGCATGTGTCTCGCAG
Suggested primer 2:TGCATTCCAGTTGCAACGTG