Insertion junction: CLIP2.064831_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.064831
Chromosome:chromosome 12
Location:2598666
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g506550 3'UTR
Cre12.g801383 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGAACGGTGGTCCATGAATCCCTTGCGGAATCGGGCTGCGTGCGCCGCA
Internal bar code:GTTTGAAACAGGGGTTGTTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1148
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGGACCAAAAGCAGCCAC
Suggested primer 2:GACCCTTGACGTTACCTGCA