Insertion junction: CLIP2.064839_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.064839
Chromosome:chromosome 10
Location:5385910
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g457050 (1 of 41) IPR000719//IPR011009 - Protein kinase domain // Protein kinase-like domain 5'UTR
Cre10.g457100 (1 of 1) 1.13.11.79 - 5,6-dimethylbenzimidazole synthase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAACAAAAAGGCGGAGGCCAATACGATAGCAATGCGTTTAACGAAAGTA
Internal bar code:CTTTCGGGGGCAGCTACTGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:4077
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGTTTATGCAGGAGTGGC
Suggested primer 2:CGCCTGAGATACGCATCCTT