Insertion junction: CLIP2.064839_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.064839
Chromosome:chromosome 10
Location:5385918
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g457050 (1 of 41) IPR000719//IPR011009 - Protein kinase domain // Protein kinase-like domain 5'UTR
Cre10.g457100 (1 of 1) 1.13.11.79 - 5,6-dimethylbenzimidazole synthase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGTTGCGAGCGCCACTCTGTGCTTCACTCTGAGCCAGACTCTGAGCTC
Internal bar code:CTCTCGGCGTCGCGCGGTTCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4057
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:72
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCTGAGATACGCATCCTT
Suggested primer 2:AGGGTTTATGCAGGAGTGGC