Insertion junction: CLIP2.064845_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.064845
Chromosome:chromosome 1
Location:2093605
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g011630 (1 of 1) IPR001283//IPR002413//IPR003882//IPR014044 - Cysteine-rich secretory protein, allergen V5/Tpx-1-related // Ves allergen // Pistil-specific extensin-like protein // CAP domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTTTGATCTATGCCCCTCTGTTAGTAAGCTAGACTGCCAGACTTCACA
Internal bar code:GCGAGCACCAGGGGACTACCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1976
LEAP-Seq percent confirming:98.1132
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:CAAATGTGGCTGGACACTGC
Suggested primer 2:GCGGACAAACTCAGAGTGGA