Insertion junction: CLIP2.064850_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.064850
Chromosome:chromosome 16
Location:6280677
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g676200 (1 of 3) PTHR10751:SF2 - GUANYLATE-BINDING PROTEIN CDS
Cre16.g676250 MFT28 Major facilitator superfamily transporter; (1 of 2) PTHR23121:SF9 - SODIUM-DEPENDENT GLUCOSE TRANSPORTER 1 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCGAGCTCCCCCTTCACCGTCTCCGCGGGTGGCCATGCTTGGCGATTGC
Internal bar code:TGAACGAGCAAGGATATCGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1959
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCTTGCTGAATGCTTGGC
Suggested primer 2:TAGCTGCTTGCCACTTCGAA