Insertion junction: CLIP2.064850_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.064850
Chromosome:chromosome 16
Location:6280684
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g676200 (1 of 3) PTHR10751:SF2 - GUANYLATE-BINDING PROTEIN CDS
Cre16.g676250 MFT28 Major facilitator superfamily transporter; (1 of 2) PTHR23121:SF9 - SODIUM-DEPENDENT GLUCOSE TRANSPORTER 1 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGACGCCAGCGGCAGGGGGAGAACCGTTGCAACTCATCGCGCACAACG
Internal bar code:TGAACGAGCAAGGATATCGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2825
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCTGCTTGCCACTTCGAA
Suggested primer 2:AAGCTTGCTGAATGCTTGGC