Insertion junction: CLIP2.064851_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.064851
Chromosome:chromosome 3
Location:6520221
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g194050 (1 of 274) IPR020683 - Ankyrin repeat-containing domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACTGTGGTGCCCCCTGTCCACACTGTGGTGCCCCCCTGACCACACTGT
Internal bar code:ACTCATATGTACGTCCAATTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:98
LEAP-Seq percent confirming:40.9091
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GGGAGTGGTTGATGCCTGAA
Suggested primer 2:CATGTGGGCTGGCATCAAAC