Insertion junction: CLIP2.064853_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.064853
Chromosome:chromosome 2
Location:1437880
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre02.g083550 (1 of 1) PF01494//PF05834 - FAD binding domain (FAD_binding_3) // Lycopene cyclase protein (Lycopene_cycl) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTGGGCAAGGGGGAAGGTGGAAGAGCTGGGGGCGGTACGGGCAGCTTG
Internal bar code:CCGCGGCAAGTATCCACAGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:594
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCAACACCAGGAGGAGG
Suggested primer 2:GTGGTTGATGTGGTTGTGGC