Insertion junction: CLIP2.064856_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.064856
Chromosome:chromosome 1
Location:1659317
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g009101 (1 of 37) PF13639 - Ring finger domain (zf-RING_2) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGACGAGCGTTTTTTGCAGATGAGAGGGGCCCGTGGCCTGTGGTGGCA
Internal bar code:ATCTCGGTCTTTTCTATGTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2672
LEAP-Seq percent confirming:97.2222
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:TGAATGTTGTTGGCGCCTTG
Suggested primer 2:GCGAGGGAGTATGTCTGAGC