Insertion junction: CLIP2.064856_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.064856
Chromosome:chromosome 1
Location:1659328
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g009101 (1 of 37) PF13639 - Ring finger domain (zf-RING_2) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCTCGTCCTTTCCCAAGGCTTGCACACCACCACTCCGCGCCTTATTTGG
Internal bar code:ATCTCGGTCTTTTCTATGTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2358
LEAP-Seq percent confirming:97.619
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:GCGAGGGAGTATGTCTGAGC
Suggested primer 2:TGAATGTTGTTGGCGCCTTG