Insertion junction: CLIP2.064857_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.064857
Chromosome:chromosome 17
Location:2722998
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802055 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGTGGTGCTGTAGTTGGTGGGAGAGCAGGCAGTACGCAGGCACCCAGC
Internal bar code:CCTCATACGTTCGGGGTAGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2717
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGCAAAGTTGGCATGACG
Suggested primer 2:AGTAGTAGATGCATGCGGCC