Insertion junction: CLIP2.064865_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.064865
Chromosome:chromosome 10
Location:3034696
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g440800 (1 of 88) IPR011333 - POZ domain outside_mRNA
Cre10.g440850 GPX4 Glutathione peroxidase 4; (1 of 2) 1.11.1.12 - Phospholipid-hydroperoxide glutathione peroxidase / Peroxidation-inhibiting protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACTTCTCTGATGCGGCAGAGGGCTGTCGATTCCAAAATCCCGTCGATCC
Internal bar code:CGTAAAATTAGGTGTGTCTCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2047
LEAP-Seq percent confirming:47.0588
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTGGCACATGTCTAGGTT
Suggested primer 2:CGTGAGGTATCCCCGTTACG