Insertion junction: CLIP2.064868_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.064868
Chromosome:chromosome 2
Location:3143842
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g096455 5'UTR
Cre02.g096500 (1 of 18) 2.7.10.2//2.7.11.1 - Non-specific protein-tyrosine kinase / Cytoplasmic protein tyrosine kinase // Non-specific serine/threonine protein kinase / Threonine-specific protein kinase outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTGCGGGGTAAGGGTGCCAGAGCGAGCTGGCCGCGGATGGAGGTGTGT
Internal bar code:AGACTTGCACGTGGGGTTGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3919
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:81
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTGTGTGTGAACGGAAAC
Suggested primer 2:GTAGGCAGTGCTGGTGAAGT