Insertion junction: CLIP2.064874_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.064874
Chromosome:chromosome 17
Location:1003661
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g703176 MSD5 (1 of 5) K04564 - superoxide dismutase, Fe-Mn family (SOD2); Mn superoxide dismutase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTATTTATGGGGGTCCTGGTTATCAGGTGCTTTAAGCTGCAATGGAGGA
Internal bar code:CGAATCCTCTAGTGAAGGTCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:978
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTTTGTGCGTGAGTAGGG
Suggested primer 2:AAAAACTTTGCGAGCGGTCC