Insertion junction: CLIP2.064875_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.064875
Chromosome:chromosome 6
Location:6735301
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g295450 HPR1 (1 of 1) 1.1.1.29 - Glycerate dehydrogenase / Hydroxypyruvate reductase; Hydroxyl pyruvate reductase 3'UTR
Cre06.g295500 (1 of 33) IPR013830 - SGNH hydrolase-type esterase domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAACACAAATACTTCCTCGAGTTACCGAGCACTCAGCAGAATAGCCAAT
Internal bar code:CGCAAGAAACTGAAGAGTCCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2575
LEAP-Seq percent confirming:4.16667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CGATACCTGCAAACATGCGG
Suggested primer 2:GATATGGGTATGGGCGTGGG