Insertion junction: CLIP2.064889_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.064889
Chromosome:chromosome 8
Location:1393628
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g364200 (1 of 70) PF07282 - Putative transposase DNA-binding domain (OrfB_Zn_ribbon) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTCTTACTCCGCGTGAAGCTTGAATCAGCCAGGCCTTTGCATGCGCAT
Internal bar code:GTTTATGGCGACGTCTGGCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2609
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CCCATGCGCATTACAGAAGC
Suggested primer 2:CACACAGTTCCGCAGTGTTG