Insertion junction: CLIP2.064895_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.064895
Chromosome:chromosome 2
Location:2857156
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g094700 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTCTATAGTAAACGGAATATACTCAGCACGCAACTCACCGGCGGGCGAC
Internal bar code:GGGCAGAGTTTGGTCGGTGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1964
LEAP-Seq percent confirming:87.0968
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTCCAGAGTTTCGCCCTC
Suggested primer 2:GCACGTGCACCATGATGATC