Insertion junction: CLIP2.064897_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.064897
Chromosome:chromosome 3
Location:6571774
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g194535 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCAAGCGGTCAGATGTCCAAACTTCACGCGCCCGCACTGCACCAACGC
Internal bar code:CTTTCAGTTAGGGTTAGTCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3912
LEAP-Seq percent confirming:82.3529
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:85

Suggested primers for confirmation by PCR

Suggested primer 1:GGTCGTACTCTCAGCTGTCG
Suggested primer 2:CTTCGCCTTCGCTAACATGC