Insertion junction: CLIP2.064904_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.064904
Chromosome:chromosome 1
Location:3659429
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g023773 (1 of 6) IPR000253//IPR008984 - Forkhead-associated (FHA) domain // SMAD/FHA domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGATGGAAGGGGGCTTCGAAGGGCCATGGCCAGGGCATGCCAGGGGCACG
Internal bar code:GCAATTTCTGAGCCCGGTGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:847
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TTATCCGCACGTCGCTACTC
Suggested primer 2:AAGACTGATGGGCATTGGGG