Insertion junction: CLIP2.064906_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.064906
Chromosome:chromosome 2
Location:1440625
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g083550 (1 of 1) PF01494//PF05834 - FAD binding domain (FAD_binding_3) // Lycopene cyclase protein (Lycopene_cycl) 3'UTR
Cre02.g083600 (1 of 1) PTHR23305//PTHR23305:SF7 - GTP-BINDING PROTEIN-RELATED // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAATACAAGTAACTGGTGCAATACAAACAGTGCTGTACTTGCTTCTTTA
Internal bar code:ATCTCTGAACTCTGGTCGCACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1999
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AAATGGGGAAGAGCAGGAGC
Suggested primer 2:CTGTGGAGCAGGAGGATGTG