Insertion junction: CLIP2.064908_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.064908
Chromosome:chromosome 6
Location:3141089
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g275600 5'UTR
Cre06.g275650 RPN3 (1 of 1) K03033 - 26S proteasome regulatory subunit N3 (PSMD3, RPN3); 26S proteasome regulatory subunit 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGATCCTTTCAGCTCGCAAGGTTGTGCAACTTCACCCGTGGCACCGTCC
Internal bar code:CCGTGCAGTTGGATCGCGATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1806
LEAP-Seq percent confirming:92.5926
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CCGACAACTTCTTCCTGCCT
Suggested primer 2:AGGACGAGGACGACTTCTGA